GAI and La Jolla Institute for Immunology

A Unified Mission

Established in 2024, the partnership between the Global Autoimmune Institute (GAI) and La Jolla Institute for Immunology (LJI) has grown into a multifaceted collaboration advancing autoimmune disease research, scientific education, and public engagement.

To date, GAI has committed more than $1.8 million to support research, scientific infrastructure, educational initiatives, scientific events, and public resources through its partnership with LJI.

LJI is one of the few organizations in the world solely dedicated to research on the immune system. Its Center for Autoimmunity and Inflammation enables LJI’s experts to uncover the causes and commonalities among different autoimmune diseases and to develop new treatments that teach the immune system to tolerate the body’s own cells. As a result, LJI researchers have wide-ranging expertise in the fundamental mechanisms of self-tolerance, as well as in many of the autoimmune diseases that result when self-tolerance breaks down.

What began as a catalytic investment has evolved into a sustained commitment that is enabling deeper discovery, expanded collaboration, and a more continuous path from fundamental insight to translational impact.

Eileen Timken, MPA

Director of Advancement, La Jolla Institute for Immunology

GAI/LJI 2025-2026 Impact Report

Dr. Sam Myers

GAI proudly supports the work of LJI’s Dr. Sam Myers, the inaugural Global Autoimmune Institute Assistant Professor. Dr. Myers leads the Laboratory for Immunochemical Circuits, which focuses on how molecular modifications affect immune cell behavior, providing critical insights into autoimmune disease mechanisms.

In 2025, GAI renewed its support for Dr. Myers with a five-year commitment to fund the GAI Assistant Professorship and ensure long-term continuity in his research.

As the Global Autoimmune Institute Assistant Professor, Dr. Myers leads a research program focused on decoding the molecular signals that govern immune cell behavior—work that is redefining how autoimmune diseases are understood at their most fundamental level. With GAI’s support, his lab has been able to pursue high-risk, high-reward questions, expand its suite of cutting-edge technologies, recruit exceptional scientific talent, and build collaborative networks that extend across disciplines and institutions. This flexibility, which is especially rare for early-career faculty, has enabled discoveries that would not otherwise be possible.

Excerpted from the
2025–2026 GAI/LJI Impact Report
Dr. Sam Myers, GAI Executive Director Sandra Boek Werness, Dr. Bruce Werness, and GAI Board Member Liz Loftus
With GAI’s support, the Myers lab acquired the Astral mass spectrometry platform in fall 2024, bringing advanced proteomic capabilities to LJI and expanding the lab’s ability to investigate immune signaling and autoimmune disease mechanisms.

The Decision Makers

The Decision Makers is a short documentary highlighting Dr. Sam Myers’ research journey, scientific leadership, and contributions to autoimmune disease research. Through interviews and behind-the-scenes footage, the film offers an inside look at the people, discoveries, and partnerships helping advance our understanding of immune-mediated disease while exploring the role philanthropy can play in accelerating scientific progress.

Walter and Jean Boek Seminar Series

GAI LJI Impact Report 2025 Walter and Jean Boek Seminar Series

This impact report prepared by LJI highlights the first year of the Walter and Jean Boek Seminar Series and the Walter and Jean Boek Leadership in Research Award Lecture. It reflects GAI’s support for scientific collaboration, thought leadership, and patient engagement through programs that bring together researchers, clinicians, advocates, and families while advancing dialogue around autoimmune disease research and innovation.

To view upcoming seminars, access previously recorded presentations, and learn more about the series, visit: https://www.lji.org/events/seminars/

Live From the Lab

Full recap

On March 19, 2025, GAI and LJI held a virtual event offering a rare behind-the-scenes look into pioneering autoimmune research. In this session, viewers were introduced to the overlooked role of non-immune cells, such as those in the skin and blood vessels, as critical first responders in autoimmune and inflammatory responses.

Dr. Sharma led attendees through an eye-opening exploration of how early immune signaling by these cells can influence disease progression. Using cutting-edge techniques like genome-scale RNA interference, CRISPR/Cas9, and mass spectrometry metabolomics, Dr. Sharma revealed how this research is shaping the future of autoimmune disease understanding and treatment.

Whether seeking personal insight or scientific enrichment, attendees walked away with a deeper appreciation for the hidden complexity of immune system triggers. A lively Q&A session followed, moderated by GAI Executive Director Sandy Boek Werness, J.D.

GAI Stewardship Report Sep 2025 – sponsorship of LJI Life Without Disease seminar and Live from the Lab webinar

Patient Engagement Programs Impact Report

This impact report prepared by LJI highlights GAI-sponsored public education and outreach initiatives, including the Life Without Disease lecture series and Live from the Lab webinar program. It reflects ongoing efforts to make complex immunology research more accessible while creating meaningful opportunities for patients, advocates, and the broader community to engage with the science shaping the future of autoimmune disease research.

Life Without Disease Seminar

Held in La Jolla, CA on November 7, 2024

LJI’s Life Without Disease seminar series connects Southern California with the frontlines of immune research, highlighting discoveries that could transform the future of human health.

Outsmarting Autoimmune Disease

If we want to control how immune cells behave, we first need to understand how they “think” and “make decisions.”

In the fall of 2024, GAI helped bring together researchers through a seminar at La Jolla Institute for Immunology featuring Samuel Anthony Myers, Ph.D., the inaugural Global Autoimmune Institute Assistant Professor.

Dr. Myers highlighted how his research combines mass spectrometry and proteomics to understand how immune cells make decisions, providing new insights into the mechanisms underlying autoimmune, inflammatory, and other diseases.

Event Photographs

More event photographs

Printed Features

Communicating science is vital to empowering patients and physicians alike.

Immune Matters Magazine

Featuring interviews and articles on the partnership’s achievements, this biannual publication offers a window into the transformative research underway.

Resource Guide (coming soon)

GAI has supported LJI’s development of engaging infographics that educate the public on autoimmune diseases and the progress being made to combat them.